Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.42■□□□□ 0.22
Cd40P27512 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cd40P27512 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.42■□□□□ 0.22
Cd40P27512 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cd40P27512 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd40P27512 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cd40P27512 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.41■□□□□ 0.22
Cd40P27512 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.41■□□□□ 0.22
Cd40P27512 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd40P27512 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cd40P27512 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cd40P27512 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cd40P27512 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Gm12441-201ENSMUST00000121806 588 ntBASIC16.4■□□□□ 0.22
Cd40P27512 Gm38285-201ENSMUST00000192928 922 ntBASIC16.4■□□□□ 0.22
Cd40P27512 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.4■□□□□ 0.22
Cd40P27512 Gm2559-201ENSMUST00000201323 363 ntBASIC16.4■□□□□ 0.22
Cd40P27512 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cd40P27512 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.4■□□□□ 0.22
Cd40P27512 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.4■□□□□ 0.22
Cd40P27512 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd40P27512 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.39■□□□□ 0.22
Cd40P27512 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cd40P27512 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cd40P27512 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Cd40P27512 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cd40P27512 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Zfp783-201ENSMUST00000095946 670 ntBASIC16.39■□□□□ 0.21
Cd40P27512 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd40P27512 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cd40P27512 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd40P27512 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd40P27512 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.38■□□□□ 0.21
Cd40P27512 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.38■□□□□ 0.21
Cd40P27512 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cd40P27512 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.38■□□□□ 0.21
Cd40P27512 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.38■□□□□ 0.21
Cd40P27512 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.38■□□□□ 0.21
Cd40P27512 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cd40P27512 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.38■□□□□ 0.21
Cd40P27512 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd40P27512 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.37■□□□□ 0.21
Cd40P27512 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Cd40P27512 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.37■□□□□ 0.21
Cd40P27512 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd40P27512 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.37■□□□□ 0.21
Cd40P27512 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms