Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nfkb1P25799 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.6■□□□□ 0.57
Nfkb1P25799 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.6■□□□□ 0.57
Nfkb1P25799 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.6■□□□□ 0.57
Nfkb1P25799 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.6■□□□□ 0.57
Nfkb1P25799 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nfkb1P25799 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.59■□□□□ 0.57
Nfkb1P25799 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.59■□□□□ 0.57
Nfkb1P25799 Gm38285-201ENSMUST00000192928 922 ntBASIC18.59■□□□□ 0.57
Nfkb1P25799 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.59■□□□□ 0.57
Nfkb1P25799 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nfkb1P25799 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.58■□□□□ 0.57
Nfkb1P25799 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nfkb1P25799 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.58■□□□□ 0.57
Nfkb1P25799 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nfkb1P25799 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nfkb1P25799 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nfkb1P25799 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Mir1199-201ENSMUST00000117015 119 ntBASIC18.58■□□□□ 0.56
Nfkb1P25799 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.58■□□□□ 0.56
Nfkb1P25799 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nfkb1P25799 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nfkb1P25799 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nfkb1P25799 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.57■□□□□ 0.56
Nfkb1P25799 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.57■□□□□ 0.56
Nfkb1P25799 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nfkb1P25799 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.56■□□□□ 0.56
Nfkb1P25799 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Nfkb1P25799 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.56■□□□□ 0.56
Nfkb1P25799 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Gm10138-203ENSMUST00000206952 366 ntBASIC18.56■□□□□ 0.56
Nfkb1P25799 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nfkb1P25799 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nfkb1P25799 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nfkb1P25799 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nfkb1P25799 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nfkb1P25799 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nfkb1P25799 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nfkb1P25799 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nfkb1P25799 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nfkb1P25799 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nfkb1P25799 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms