Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.14■□□□□ 0.01
Col8a2P25318 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col8a2P25318 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col8a2P25318 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.14■□□□□ 0.01
Col8a2P25318 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.14■□□□□ 0.01
Col8a2P25318 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.14■□□□□ 0.01
Col8a2P25318 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col8a2P25318 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col8a2P25318 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col8a2P25318 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Col8a2P25318 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Col8a2P25318 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col8a2P25318 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col8a2P25318 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Col8a2P25318 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.13■□□□□ 0.01
Col8a2P25318 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.13■□□□□ 0.01
Col8a2P25318 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.13■□□□□ 0.01
Col8a2P25318 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.13■□□□□ 0.01
Col8a2P25318 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.13■□□□□ 0.01
Col8a2P25318 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.13■□□□□ 0.01
Col8a2P25318 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.13■□□□□ 0.01
Col8a2P25318 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col8a2P25318 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Col8a2P25318 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col8a2P25318 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.12■□□□□ 0.01
Col8a2P25318 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.12■□□□□ 0.01
Col8a2P25318 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.12■□□□□ 0.01
Col8a2P25318 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Zfp783-201ENSMUST00000095946 670 ntBASIC15.12■□□□□ 0.01
Col8a2P25318 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col8a2P25318 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col8a2P25318 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col8a2P25318 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.11■□□□□ 0.01
Col8a2P25318 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col8a2P25318 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.11■□□□□ 0.01
Col8a2P25318 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Gm10812-201ENSMUST00000099864 546 ntBASIC15.11■□□□□ 0.01
Col8a2P25318 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col8a2P25318 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col8a2P25318 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Col8a2P25318 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Flg-201ENSMUST00000050758 1488 ntBASIC15.1■□□□□ 0.01
Col8a2P25318 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.1■□□□□ 0.01
Col8a2P25318 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.1■□□□□ 0.01
Col8a2P25318 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.1■□□□□ 0.01
Col8a2P25318 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.1■□□□□ 0.01
Col8a2P25318 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.1■□□□□ 0.01
Col8a2P25318 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col8a2P25318 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.1■□□□□ 0.01
Col8a2P25318 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.1■□□□□ 0.01
Col8a2P25318 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col8a2P25318 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.09■□□□□ 0.01
Col8a2P25318 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.09■□□□□ 0.01
Col8a2P25318 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.09■□□□□ 0.01
Col8a2P25318 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.09■□□□□ 0.01
Col8a2P25318 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col8a2P25318 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col8a2P25318 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms