Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.49■□□□□ 0.23
Cbx3P23198 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Cbx3P23198 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cbx3P23198 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Cbx3P23198 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cbx3P23198 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.49■□□□□ 0.23
Cbx3P23198 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cbx3P23198 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Cbx3P23198 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.49■□□□□ 0.23
Cbx3P23198 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cbx3P23198 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cbx3P23198 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cbx3P23198 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cbx3P23198 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cbx3P23198 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.47■□□□□ 0.23
Cbx3P23198 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.47■□□□□ 0.23
Cbx3P23198 Gm7143-201ENSMUST00000222811 859 ntBASIC16.47■□□□□ 0.23
Cbx3P23198 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cbx3P23198 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.46■□□□□ 0.23
Cbx3P23198 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cbx3P23198 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.46■□□□□ 0.23
Cbx3P23198 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cbx3P23198 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.46■□□□□ 0.23
Cbx3P23198 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.46■□□□□ 0.23
Cbx3P23198 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cbx3P23198 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cbx3P23198 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cbx3P23198 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cbx3P23198 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cbx3P23198 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cbx3P23198 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.45■□□□□ 0.22
Cbx3P23198 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cbx3P23198 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cbx3P23198 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cbx3P23198 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms