Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm12918-201ENSMUST00000120234 636 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Gm15710-201ENSMUST00000121821 636 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Gm26571-201ENSMUST00000181399 666 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Gm27405-201ENSMUST00000184201 112 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Gm5075-201ENSMUST00000196916 622 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.81■□□□□ 0.28
Clk1P22518 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.81■□□□□ 0.28
Clk1P22518 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk1P22518 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Gm6420-201ENSMUST00000193885 723 ntBASIC16.8■□□□□ 0.28
Clk1P22518 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clk1P22518 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Clk1P22518 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.8■□□□□ 0.28
Clk1P22518 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.8■□□□□ 0.28
Clk1P22518 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clk1P22518 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clk1P22518 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clk1P22518 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.79■□□□□ 0.28
Clk1P22518 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Clk1P22518 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.79■□□□□ 0.28
Clk1P22518 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Clk1P22518 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.79■□□□□ 0.28
Clk1P22518 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clk1P22518 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clk1P22518 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Clk1P22518 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.78■□□□□ 0.28
Clk1P22518 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.78■□□□□ 0.28
Clk1P22518 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.78■□□□□ 0.28
Clk1P22518 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.78■□□□□ 0.28
Clk1P22518 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clk1P22518 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Clk1P22518 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clk1P22518 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clk1P22518 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clk1P22518 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.77■□□□□ 0.27
Clk1P22518 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clk1P22518 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Clk1P22518 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clk1P22518 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clk1P22518 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clk1P22518 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clk1P22518 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clk1P22518 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clk1P22518 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.76■□□□□ 0.27
Clk1P22518 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms