Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Kcna1P16388 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Kcna1P16388 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.59■□□□□ 0.89
Kcna1P16388 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Kcna1P16388 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcna1P16388 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kcna1P16388 Gm13158-201ENSMUST00000122007 736 ntBASIC20.58■□□□□ 0.89
Kcna1P16388 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Kcna1P16388 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.58■□□□□ 0.89
Kcna1P16388 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kcna1P16388 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.58■□□□□ 0.88
Kcna1P16388 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kcna1P16388 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kcna1P16388 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kcna1P16388 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Kcna1P16388 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.57■□□□□ 0.88
Kcna1P16388 Gm10698-201ENSMUST00000182663 604 ntBASIC20.57■□□□□ 0.88
Kcna1P16388 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.57■□□□□ 0.88
Kcna1P16388 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.57■□□□□ 0.88
Kcna1P16388 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcna1P16388 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Kcna1P16388 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Tgds-204ENSMUST00000228543 1594 ntBASIC20.56■□□□□ 0.88
Kcna1P16388 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.56■□□□□ 0.88
Kcna1P16388 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.56■□□□□ 0.88
Kcna1P16388 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcna1P16388 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.55■□□□□ 0.88
Kcna1P16388 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.55■□□□□ 0.88
Kcna1P16388 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcna1P16388 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kcna1P16388 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.54■□□□□ 0.88
Kcna1P16388 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcna1P16388 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.53■□□□□ 0.88
Kcna1P16388 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.53■□□□□ 0.88
Kcna1P16388 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Kcna1P16388 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kcna1P16388 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kcna1P16388 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Kcna1P16388 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.52■□□□□ 0.88
Kcna1P16388 Gm18666-201ENSMUST00000190039 958 ntBASIC20.52■□□□□ 0.88
Kcna1P16388 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcna1P16388 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Kcna1P16388 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Kcna1P16388 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Kcna1P16388 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Kcna1P16388 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.51■□□□□ 0.87
Kcna1P16388 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.51■□□□□ 0.87
Kcna1P16388 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.51■□□□□ 0.87
Kcna1P16388 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcna1P16388 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms