Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.37■□□□□ 0.37
Cntn1P12960 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
Cntn1P12960 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cntn1P12960 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Cntn1P12960 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.36■□□□□ 0.37
Cntn1P12960 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cntn1P12960 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.36■□□□□ 0.37
Cntn1P12960 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cntn1P12960 Gm13158-201ENSMUST00000122007 736 ntBASIC17.35■□□□□ 0.37
Cntn1P12960 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cntn1P12960 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.35■□□□□ 0.37
Cntn1P12960 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cntn1P12960 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cntn1P12960 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.35■□□□□ 0.37
Cntn1P12960 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.34■□□□□ 0.37
Cntn1P12960 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cntn1P12960 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cntn1P12960 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.34■□□□□ 0.37
Cntn1P12960 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Mtag2-201ENSMUST00000058665 714 ntBASIC17.34■□□□□ 0.37
Cntn1P12960 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cntn1P12960 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cntn1P12960 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.33■□□□□ 0.37
Cntn1P12960 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cntn1P12960 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cntn1P12960 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cntn1P12960 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cntn1P12960 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.33■□□□□ 0.36
Cntn1P12960 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Zfp783-201ENSMUST00000095946 670 ntBASIC17.33■□□□□ 0.36
Cntn1P12960 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn1P12960 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.32■□□□□ 0.36
Cntn1P12960 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cntn1P12960 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.32■□□□□ 0.36
Cntn1P12960 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn1P12960 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn1P12960 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn1P12960 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.31■□□□□ 0.36
Cntn1P12960 Gm10698-201ENSMUST00000182663 604 ntBASIC17.31■□□□□ 0.36
Cntn1P12960 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cntn1P12960 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn1P12960 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms