Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cxcl1P12850 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cxcl1P12850 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cxcl1P12850 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cxcl1P12850 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.03■□□□□ -0
Cxcl1P12850 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl1P12850 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl1P12850 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.02■□□□□ -0
Cxcl1P12850 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl1P12850 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl1P12850 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl1P12850 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.01□□□□□ -0.01
Cxcl1P12850 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl1P12850 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl1P12850 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cxcl1P12850 Gm12821-201ENSMUST00000120022 600 ntBASIC15□□□□□ -0.01
Cxcl1P12850 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Cxcl1P12850 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15□□□□□ -0.01
Cxcl1P12850 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Gm6139-201ENSMUST00000079261 882 ntBASIC15□□□□□ -0.01
Cxcl1P12850 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15□□□□□ -0.01
Cxcl1P12850 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl1P12850 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.99□□□□□ -0.01
Cxcl1P12850 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.99□□□□□ -0.01
Cxcl1P12850 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Cxcl1P12850 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl1P12850 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cxcl1P12850 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl1P12850 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms