Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Ercc1P07903 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.17■□□□□ 0.02
Ercc1P07903 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc1P07903 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.17■□□□□ 0.02
Ercc1P07903 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.17■□□□□ 0.02
Ercc1P07903 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc1P07903 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc1P07903 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ercc1P07903 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc1P07903 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc1P07903 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ercc1P07903 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc1P07903 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.15■□□□□ 0.02
Ercc1P07903 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.15■□□□□ 0.02
Ercc1P07903 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
Ercc1P07903 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc1P07903 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ercc1P07903 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.15■□□□□ 0.02
Ercc1P07903 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc1P07903 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc1P07903 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.14■□□□□ 0.01
Ercc1P07903 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Gm7860-201ENSMUST00000121190 879 ntBASIC15.14■□□□□ 0.01
Ercc1P07903 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.14■□□□□ 0.01
Ercc1P07903 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.14■□□□□ 0.01
Ercc1P07903 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.14■□□□□ 0.01
Ercc1P07903 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc1P07903 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc1P07903 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc1P07903 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc1P07903 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.13■□□□□ 0.01
Ercc1P07903 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Ercc1P07903 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.13■□□□□ 0.01
Ercc1P07903 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ercc1P07903 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms