Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Gm7860-201ENSMUST00000121190 879 ntBASIC15.2■□□□□ 0.02
Cd74P04441 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.2■□□□□ 0.02
Cd74P04441 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.2■□□□□ 0.02
Cd74P04441 Gm6420-201ENSMUST00000193885 723 ntBASIC15.2■□□□□ 0.02
Cd74P04441 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.2■□□□□ 0.02
Cd74P04441 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cd74P04441 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cd74P04441 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.19■□□□□ 0.02
Cd74P04441 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.19■□□□□ 0.02
Cd74P04441 Gm27011-201ENSMUST00000182352 972 ntBASIC15.19■□□□□ 0.02
Cd74P04441 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cd74P04441 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd74P04441 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cd74P04441 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cd74P04441 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd74P04441 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd74P04441 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd74P04441 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd74P04441 Gm5408-201ENSMUST00000197998 747 ntBASIC15.17■□□□□ 0.02
Cd74P04441 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Cd74P04441 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd74P04441 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cd74P04441 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd74P04441 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd74P04441 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd74P04441 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Nespas-201ENSMUST00000143738 1083 ntBASIC15.16■□□□□ 0.02
Cd74P04441 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Gm4968-201ENSMUST00000071458 858 ntBASIC15.16■□□□□ 0.02
Cd74P04441 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd74P04441 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cd74P04441 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.16■□□□□ 0.02
Cd74P04441 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.16■□□□□ 0.02
Cd74P04441 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd74P04441 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.15■□□□□ 0.02
Cd74P04441 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.15■□□□□ 0.02
Cd74P04441 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms