Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Hbb-b1P02088 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.84□□□□□ -0.35
Hbb-b1P02088 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.84□□□□□ -0.35
Hbb-b1P02088 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hbb-b1P02088 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hbb-b1P02088 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Hbb-b1P02088 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hbb-b1P02088 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hbb-b1P02088 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hbb-b1P02088 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hbb-b1P02088 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.83□□□□□ -0.36
Hbb-b1P02088 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hbb-b1P02088 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.82□□□□□ -0.36
Hbb-b1P02088 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hbb-b1P02088 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.81□□□□□ -0.36
Hbb-b1P02088 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hbb-b1P02088 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.8□□□□□ -0.36
Hbb-b1P02088 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.8□□□□□ -0.36
Hbb-b1P02088 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hbb-b1P02088 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms