Protein–RNA interactions for Protein: P01740

T-cell receptor gamma chain V region V108A, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01740 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
P01740 Gm18671-201ENSMUST00000214826 683 ntBASIC17.93■□□□□ 0.46
P01740 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
P01740 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
P01740 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.93■□□□□ 0.46
P01740 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.93■□□□□ 0.46
P01740 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01740 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
P01740 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
P01740 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.92■□□□□ 0.46
P01740 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
P01740 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
P01740 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.92■□□□□ 0.46
P01740 Gm42642-201ENSMUST00000200683 355 ntBASIC17.92■□□□□ 0.46
P01740 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.92■□□□□ 0.46
P01740 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01740 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.91■□□□□ 0.46
P01740 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.91■□□□□ 0.46
P01740 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P01740 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
P01740 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
P01740 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
P01740 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
P01740 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01740 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P01740 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
P01740 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.89■□□□□ 0.45
P01740 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P01740 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
P01740 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.89■□□□□ 0.45
P01740 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P01740 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.89■□□□□ 0.45
P01740 Gm5874-201ENSMUST00000096101 508 ntBASIC17.89■□□□□ 0.45
P01740 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P01740 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
P01740 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.89■□□□□ 0.45
P01740 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P01740 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
P01740 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.88■□□□□ 0.45
P01740 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
P01740 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
P01740 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01740 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
P01740 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.87■□□□□ 0.45
P01740 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
P01740 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms