Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.33■□□□□ 0.36
Hcn1O88704 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.33■□□□□ 0.36
Hcn1O88704 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.33■□□□□ 0.36
Hcn1O88704 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn1O88704 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn1O88704 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn1O88704 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Fst-202ENSMUST00000223640 2612 ntBASIC17.32■□□□□ 0.36
Hcn1O88704 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hcn1O88704 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hcn1O88704 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.32■□□□□ 0.36
Hcn1O88704 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Hcn1O88704 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn1O88704 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcn1O88704 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcn1O88704 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hcn1O88704 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcn1O88704 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.31■□□□□ 0.36
Hcn1O88704 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn1O88704 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
Hcn1O88704 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hcn1O88704 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.3■□□□□ 0.36
Hcn1O88704 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.3■□□□□ 0.36
Hcn1O88704 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hcn1O88704 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hcn1O88704 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn1O88704 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hcn1O88704 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hcn1O88704 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.29■□□□□ 0.36
Hcn1O88704 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.29■□□□□ 0.36
Hcn1O88704 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.29■□□□□ 0.36
Hcn1O88704 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.29■□□□□ 0.36
Hcn1O88704 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.29■□□□□ 0.36
Hcn1O88704 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn1O88704 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hcn1O88704 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Hcn1O88704 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.28■□□□□ 0.36
Hcn1O88704 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Hcn1O88704 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms