Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.51■□□□□ 0.07
Cldn1O88551 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.51■□□□□ 0.07
Cldn1O88551 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.51■□□□□ 0.07
Cldn1O88551 Gm30025-201ENSMUST00000218555 728 ntBASIC15.51■□□□□ 0.07
Cldn1O88551 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cldn1O88551 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cldn1O88551 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.51■□□□□ 0.07
Cldn1O88551 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Cldn1O88551 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cldn1O88551 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cldn1O88551 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.5■□□□□ 0.07
Cldn1O88551 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldn1O88551 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Cldn1O88551 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Cldn1O88551 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.49■□□□□ 0.07
Cldn1O88551 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.49■□□□□ 0.07
Cldn1O88551 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.49■□□□□ 0.07
Cldn1O88551 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cldn1O88551 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.49■□□□□ 0.07
Cldn1O88551 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.49■□□□□ 0.07
Cldn1O88551 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldn1O88551 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cldn1O88551 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Gm11927-201ENSMUST00000118472 759 ntBASIC15.48■□□□□ 0.07
Cldn1O88551 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.48■□□□□ 0.07
Cldn1O88551 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldn1O88551 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.47■□□□□ 0.07
Cldn1O88551 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cldn1O88551 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.47■□□□□ 0.07
Cldn1O88551 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cldn1O88551 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldn1O88551 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cldn1O88551 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.46■□□□□ 0.07
Cldn1O88551 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Gm6659-201ENSMUST00000174752 547 ntBASIC15.46■□□□□ 0.07
Cldn1O88551 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.46■□□□□ 0.07
Cldn1O88551 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cldn1O88551 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms