Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.75■□□□□ 0.27
Cops4O88544 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cops4O88544 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.74■□□□□ 0.27
Cops4O88544 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.74■□□□□ 0.27
Cops4O88544 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.74■□□□□ 0.27
Cops4O88544 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cops4O88544 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cops4O88544 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.74■□□□□ 0.27
Cops4O88544 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.74■□□□□ 0.27
Cops4O88544 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops4O88544 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.74■□□□□ 0.27
Cops4O88544 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.73■□□□□ 0.27
Cops4O88544 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.73■□□□□ 0.27
Cops4O88544 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.73■□□□□ 0.27
Cops4O88544 Gm12821-201ENSMUST00000120022 600 ntBASIC16.73■□□□□ 0.27
Cops4O88544 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cops4O88544 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cops4O88544 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cops4O88544 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Cops4O88544 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cops4O88544 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops4O88544 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cops4O88544 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Cops4O88544 Gm8493-201ENSMUST00000196881 489 ntBASIC16.72■□□□□ 0.27
Cops4O88544 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops4O88544 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops4O88544 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Gm11421-201ENSMUST00000122124 294 ntBASIC16.71■□□□□ 0.27
Cops4O88544 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.71■□□□□ 0.27
Cops4O88544 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops4O88544 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cops4O88544 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cops4O88544 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
Cops4O88544 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.7■□□□□ 0.26
Cops4O88544 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.7■□□□□ 0.26
Cops4O88544 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.7■□□□□ 0.26
Cops4O88544 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.7■□□□□ 0.26
Cops4O88544 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.7■□□□□ 0.26
Cops4O88544 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cops4O88544 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops4O88544 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cops4O88544 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cops4O88544 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms