Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cacna1hO88427 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.72■□□□□ 0.43
Cacna1hO88427 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1hO88427 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.71■□□□□ 0.43
Cacna1hO88427 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1hO88427 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1hO88427 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1hO88427 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1hO88427 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1hO88427 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1hO88427 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1hO88427 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.71■□□□□ 0.42
Cacna1hO88427 Gm7791-201ENSMUST00000219066 539 ntBASIC17.71■□□□□ 0.42
Cacna1hO88427 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.71■□□□□ 0.42
Cacna1hO88427 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cacna1hO88427 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1hO88427 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.69■□□□□ 0.42
Cacna1hO88427 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Gm11355-201ENSMUST00000121120 306 ntBASIC17.69■□□□□ 0.42
Cacna1hO88427 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1hO88427 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.69■□□□□ 0.42
Cacna1hO88427 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1hO88427 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1hO88427 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1hO88427 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.68■□□□□ 0.42
Cacna1hO88427 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cacna1hO88427 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1hO88427 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1hO88427 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.67■□□□□ 0.42
Cacna1hO88427 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.67■□□□□ 0.42
Cacna1hO88427 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1hO88427 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1hO88427 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1hO88427 Gm2651-201ENSMUST00000203560 838 ntBASIC17.67■□□□□ 0.42
Cacna1hO88427 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cacna1hO88427 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cacna1hO88427 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1hO88427 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1hO88427 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1hO88427 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Gm7370-201ENSMUST00000219471 767 ntBASIC17.65■□□□□ 0.42
Cacna1hO88427 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cacna1hO88427 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1hO88427 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Cacna1hO88427 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Cacna1hO88427 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cacna1hO88427 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.64■□□□□ 0.41
Cacna1hO88427 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.64■□□□□ 0.41
Cacna1hO88427 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1hO88427 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cacna1hO88427 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms