Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col5a1O88207 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.46■□□□□ 0.23
Col5a1O88207 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col5a1O88207 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col5a1O88207 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Col5a1O88207 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Gm42545-201ENSMUST00000202755 922 ntBASIC16.46■□□□□ 0.23
Col5a1O88207 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.46■□□□□ 0.23
Col5a1O88207 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.46■□□□□ 0.23
Col5a1O88207 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col5a1O88207 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col5a1O88207 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Gm7284-201ENSMUST00000131667 944 ntBASIC16.45■□□□□ 0.22
Col5a1O88207 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col5a1O88207 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col5a1O88207 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col5a1O88207 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col5a1O88207 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.44■□□□□ 0.22
Col5a1O88207 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.44■□□□□ 0.22
Col5a1O88207 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.44■□□□□ 0.22
Col5a1O88207 Gm44771-201ENSMUST00000206975 626 ntBASIC16.44■□□□□ 0.22
Col5a1O88207 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col5a1O88207 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.44■□□□□ 0.22
Col5a1O88207 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a1O88207 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.43■□□□□ 0.22
Col5a1O88207 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col5a1O88207 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a1O88207 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a1O88207 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a1O88207 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Mir2861-201ENSMUST00000175539 82 ntBASIC16.42■□□□□ 0.22
Col5a1O88207 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col5a1O88207 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Col5a1O88207 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col5a1O88207 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col5a1O88207 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col5a1O88207 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a1O88207 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.41■□□□□ 0.22
Col5a1O88207 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.41■□□□□ 0.22
Col5a1O88207 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.41■□□□□ 0.22
Col5a1O88207 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.41■□□□□ 0.22
Col5a1O88207 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.41■□□□□ 0.22
Col5a1O88207 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.41■□□□□ 0.22
Col5a1O88207 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.41■□□□□ 0.22
Col5a1O88207 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col5a1O88207 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms