Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.45■□□□□ 0.22
Pdlim3O70209 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.45■□□□□ 0.22
Pdlim3O70209 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.45■□□□□ 0.22
Pdlim3O70209 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.44■□□□□ 0.22
Pdlim3O70209 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.44■□□□□ 0.22
Pdlim3O70209 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pdlim3O70209 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.44■□□□□ 0.22
Pdlim3O70209 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim3O70209 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Tgds-204ENSMUST00000228543 1594 ntBASIC16.43■□□□□ 0.22
Pdlim3O70209 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pdlim3O70209 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.43■□□□□ 0.22
Pdlim3O70209 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.43■□□□□ 0.22
Pdlim3O70209 Gm40848-201ENSMUST00000221998 324 ntBASIC16.43■□□□□ 0.22
Pdlim3O70209 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pdlim3O70209 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim3O70209 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pdlim3O70209 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pdlim3O70209 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.42■□□□□ 0.22
Pdlim3O70209 Gm26833-201ENSMUST00000180899 440 ntBASIC16.42■□□□□ 0.22
Pdlim3O70209 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.42■□□□□ 0.22
Pdlim3O70209 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pdlim3O70209 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim3O70209 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Pdlim3O70209 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pdlim3O70209 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim3O70209 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Pdlim3O70209 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pdlim3O70209 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pdlim3O70209 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.4■□□□□ 0.22
Pdlim3O70209 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms