Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trdmt1O55055 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.05■□□□□ 0.8
Trdmt1O55055 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trdmt1O55055 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.04■□□□□ 0.8
Trdmt1O55055 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Gm6659-201ENSMUST00000174752 547 ntBASIC20.04■□□□□ 0.8
Trdmt1O55055 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdmt1O55055 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.03■□□□□ 0.8
Trdmt1O55055 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trdmt1O55055 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.02■□□□□ 0.8
Trdmt1O55055 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Trdmt1O55055 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.02■□□□□ 0.8
Trdmt1O55055 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trdmt1O55055 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trdmt1O55055 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdmt1O55055 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trdmt1O55055 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trdmt1O55055 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trdmt1O55055 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.02■□□□□ 0.79
Trdmt1O55055 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trdmt1O55055 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.01■□□□□ 0.79
Trdmt1O55055 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trdmt1O55055 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trdmt1O55055 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trdmt1O55055 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Gm12085-201ENSMUST00000119263 940 ntBASIC20■□□□□ 0.79
Trdmt1O55055 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Gm10517-202ENSMUST00000192970 758 ntBASIC20■□□□□ 0.79
Trdmt1O55055 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdmt1O55055 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trdmt1O55055 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.99■□□□□ 0.79
Trdmt1O55055 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdmt1O55055 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.99■□□□□ 0.79
Trdmt1O55055 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trdmt1O55055 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trdmt1O55055 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.97■□□□□ 0.79
Trdmt1O55055 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.97■□□□□ 0.79
Trdmt1O55055 Gm18959-201ENSMUST00000208954 655 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms