Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Gm6365-201ENSMUST00000054711 744 ntBASIC19.3■□□□□ 0.68
Kcnu1O54982 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.3■□□□□ 0.68
Kcnu1O54982 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.3■□□□□ 0.68
Kcnu1O54982 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.29■□□□□ 0.68
Kcnu1O54982 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Kcnu1O54982 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.29■□□□□ 0.68
Kcnu1O54982 Gm42569-201ENSMUST00000200539 472 ntBASIC19.29■□□□□ 0.68
Kcnu1O54982 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Kcnu1O54982 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Kcnu1O54982 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kcnu1O54982 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.28■□□□□ 0.68
Kcnu1O54982 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.28■□□□□ 0.68
Kcnu1O54982 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Kcnu1O54982 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcnu1O54982 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Kcnu1O54982 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.27■□□□□ 0.68
Kcnu1O54982 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Kcnu1O54982 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcnu1O54982 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.27■□□□□ 0.68
Kcnu1O54982 Gm7291-201ENSMUST00000199147 382 ntBASIC19.27■□□□□ 0.68
Kcnu1O54982 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.27■□□□□ 0.68
Kcnu1O54982 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcnu1O54982 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.27■□□□□ 0.68
Kcnu1O54982 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Kcnu1O54982 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Kcnu1O54982 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Kcnu1O54982 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.26■□□□□ 0.67
Kcnu1O54982 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcnu1O54982 Gm8495-201ENSMUST00000188740 694 ntBASIC19.26■□□□□ 0.67
Kcnu1O54982 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Kcnu1O54982 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Kcnu1O54982 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kcnu1O54982 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.25■□□□□ 0.67
Kcnu1O54982 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.25■□□□□ 0.67
Kcnu1O54982 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kcnu1O54982 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Kcnu1O54982 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Kcnu1O54982 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.25■□□□□ 0.67
Kcnu1O54982 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Kcnu1O54982 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kcnu1O54982 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Kcnu1O54982 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Kcnu1O54982 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.24■□□□□ 0.67
Kcnu1O54982 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
Kcnu1O54982 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.24■□□□□ 0.67
Kcnu1O54982 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.24■□□□□ 0.67
Kcnu1O54982 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.24■□□□□ 0.67
Kcnu1O54982 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kcnu1O54982 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.23■□□□□ 0.67
Kcnu1O54982 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kcnu1O54982 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms