Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Efnb3O35393 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Efnb3O35393 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Efnb3O35393 Gm8493-201ENSMUST00000196881 489 ntBASIC14.33□□□□□ -0.12
Efnb3O35393 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Efnb3O35393 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.33□□□□□ -0.12
Efnb3O35393 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Efnb3O35393 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Efnb3O35393 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.32□□□□□ -0.12
Efnb3O35393 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Gm6139-201ENSMUST00000079261 882 ntBASIC14.32□□□□□ -0.12
Efnb3O35393 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
Efnb3O35393 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Efnb3O35393 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Gm27801-201ENSMUST00000184174 223 ntBASIC14.31□□□□□ -0.12
Efnb3O35393 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.31□□□□□ -0.12
Efnb3O35393 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Efnb3O35393 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Efnb3O35393 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Efnb3O35393 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Efnb3O35393 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.3□□□□□ -0.12
Efnb3O35393 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Gm11421-201ENSMUST00000122124 294 ntBASIC14.3□□□□□ -0.12
Efnb3O35393 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.3□□□□□ -0.12
Efnb3O35393 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Efnb3O35393 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Efnb3O35393 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.3□□□□□ -0.12
Efnb3O35393 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Efnb3O35393 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Efnb3O35393 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Efnb3O35393 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.3□□□□□ -0.12
Efnb3O35393 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Gm12251-201ENSMUST00000117893 792 ntBASIC14.29□□□□□ -0.12
Efnb3O35393 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.29□□□□□ -0.12
Efnb3O35393 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Efnb3O35393 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.29□□□□□ -0.12
Efnb3O35393 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Efnb3O35393 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms