Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfsf11O35235 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfsf11O35235 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.14□□□□□ -0.15
Tnfsf11O35235 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf11O35235 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfsf11O35235 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Golgb1-201ENSMUST00000023534 498 ntBASIC14.13□□□□□ -0.15
Tnfsf11O35235 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf11O35235 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf11O35235 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.12□□□□□ -0.15
Tnfsf11O35235 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Gm12922-201ENSMUST00000120626 809 ntBASIC14.11□□□□□ -0.15
Tnfsf11O35235 Gm7860-201ENSMUST00000121190 879 ntBASIC14.11□□□□□ -0.15
Tnfsf11O35235 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf11O35235 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf11O35235 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms