Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cl1O35188 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cl1O35188 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cx3cl1O35188 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cl1O35188 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.01■□□□□ 0.31
Cx3cl1O35188 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Gm44549-201ENSMUST00000208351 577 ntBASIC17.01■□□□□ 0.31
Cx3cl1O35188 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.01■□□□□ 0.31
Cx3cl1O35188 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cl1O35188 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17■□□□□ 0.31
Cx3cl1O35188 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17■□□□□ 0.31
Cx3cl1O35188 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17■□□□□ 0.31
Cx3cl1O35188 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cx3cl1O35188 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cl1O35188 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cl1O35188 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cl1O35188 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.97■□□□□ 0.31
Cx3cl1O35188 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.97■□□□□ 0.31
Cx3cl1O35188 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms