Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim55G3X8Y1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim55G3X8Y1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Rps24-207ENSMUST00000224568 714 ntBASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.61■□□□□ 0.57
Trim55G3X8Y1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Dancr-204ENSMUST00000132389 2347 ntBASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim55G3X8Y1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim55G3X8Y1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim55G3X8Y1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms