Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mir6349-201ENSMUST00000184059 97 ntBASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Gm37436-201ENSMUST00000193842 1085 ntBASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx1-1G3UXB3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx1-1G3UXB3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Gm45484-201ENSMUST00000210310 1141 ntBASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Nkx1-1G3UXB3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Gm8000-201ENSMUST00000188378 592 ntBASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx1-1G3UXB3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx1-1G3UXB3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx1-1G3UXB3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Nkx1-1G3UXB3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Gm6623-201ENSMUST00000173570 544 ntBASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx1-1G3UXB3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Gm6736-201ENSMUST00000166583 948 ntBASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Gm20614-201ENSMUST00000177106 632 ntBASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx1-1G3UXB3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Gm14716-201ENSMUST00000120138 718 ntBASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Gm11355-201ENSMUST00000121120 306 ntBASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms