Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh9F8VPK8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdh9F8VPK8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh9F8VPK8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh9F8VPK8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh9F8VPK8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh9F8VPK8 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh9F8VPK8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Gm8495-201ENSMUST00000188740 694 ntBASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Gm18671-201ENSMUST00000214826 683 ntBASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh9F8VPK8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh9F8VPK8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh9F8VPK8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh9F8VPK8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms