Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc188F6WEU2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Gm7213-201ENSMUST00000215977 950 ntBASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc188F6WEU2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Gm6623-201ENSMUST00000173570 544 ntBASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc188F6WEU2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc188F6WEU2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc188F6WEU2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc188F6WEU2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc188F6WEU2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Gm7638-201ENSMUST00000121348 967 ntBASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc188F6WEU2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc188F6WEU2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc188F6WEU2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms