Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm17555F6U8B9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Gm8495-201ENSMUST00000188740 694 ntBASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm17555F6U8B9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm17555F6U8B9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm17555F6U8B9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Gm7860-201ENSMUST00000121190 879 ntBASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm17555F6U8B9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm17555F6U8B9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Gm5874-201ENSMUST00000096101 508 ntBASIC16.7■□□□□ 0.26
Gm17555F6U8B9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm17555F6U8B9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Gm17555F6U8B9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms