Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.18■□□□□ 0.5
Gm28043E0CXC2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gm28043E0CXC2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28043E0CXC2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm28043E0CXC2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28043E0CXC2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm28043E0CXC2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.14■□□□□ 0.49
Gm28043E0CXC2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28043E0CXC2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28043E0CXC2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms