Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp27D3YV89 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp27D3YV89 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp27D3YV89 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.33■□□□□ 0.04
Mmp27D3YV89 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp27D3YV89 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp27D3YV89 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.31■□□□□ 0.04
Mmp27D3YV89 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.31■□□□□ 0.04
Mmp27D3YV89 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Gm18284-201ENSMUST00000172604 624 ntBASIC15.31■□□□□ 0.04
Mmp27D3YV89 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp27D3YV89 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp27D3YV89 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 AA386476-201ENSMUST00000098781 1665 ntBASIC15.29■□□□□ 0.04
Mmp27D3YV89 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.29■□□□□ 0.04
Mmp27D3YV89 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Gm8495-201ENSMUST00000188740 694 ntBASIC15.29■□□□□ 0.04
Mmp27D3YV89 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp27D3YV89 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.28■□□□□ 0.04
Mmp27D3YV89 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms