Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Gm12527-201ENSMUST00000117967 564 ntBASIC17.49■□□□□ 0.39
Clip3B9EHT4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Gm26524-201ENSMUST00000192339 390 ntBASIC17.49■□□□□ 0.39
Clip3B9EHT4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip3B9EHT4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.48■□□□□ 0.39
Clip3B9EHT4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.48■□□□□ 0.39
Clip3B9EHT4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Gm20049-201ENSMUST00000219950 730 ntBASIC17.48■□□□□ 0.39
Clip3B9EHT4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clip3B9EHT4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Clip3B9EHT4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clip3B9EHT4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip3B9EHT4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Gm20760-201ENSMUST00000179197 648 ntBASIC17.45■□□□□ 0.38
Clip3B9EHT4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip3B9EHT4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.44■□□□□ 0.38
Clip3B9EHT4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip3B9EHT4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms