Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Gm12887B1AVM1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gm12887B1AVM1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gm12887B1AVM1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Gm12887B1AVM1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gm12887B1AVM1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm12887B1AVM1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Gm8969-201ENSMUST00000199694 526 ntBASIC14.68□□□□□ -0.06
Gm12887B1AVM1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.68□□□□□ -0.06
Gm12887B1AVM1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm12887B1AVM1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm12887B1AVM1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms