Protein–RNA interactions for Protein: B1AS29

Grik3, Glutamate receptor ionotropic, kainate 3, mousemouse

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik3B1AS29 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.43■□□□□ 0.7
Grik3B1AS29 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.43■□□□□ 0.7
Grik3B1AS29 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Grik3B1AS29 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Grik3B1AS29 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Grik3B1AS29 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.42■□□□□ 0.7
Grik3B1AS29 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.42■□□□□ 0.7
Grik3B1AS29 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.42■□□□□ 0.7
Grik3B1AS29 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.42■□□□□ 0.7
Grik3B1AS29 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.42■□□□□ 0.7
Grik3B1AS29 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Grik3B1AS29 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Gm38285-201ENSMUST00000192928 922 ntBASIC19.41■□□□□ 0.7
Grik3B1AS29 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Mtag2-201ENSMUST00000058665 714 ntBASIC19.41■□□□□ 0.7
Grik3B1AS29 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.41■□□□□ 0.7
Grik3B1AS29 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Grik3B1AS29 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.4■□□□□ 0.7
Grik3B1AS29 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Mir1199-201ENSMUST00000117015 119 ntBASIC19.4■□□□□ 0.7
Grik3B1AS29 Gm715-201ENSMUST00000117865 831 ntBASIC19.4■□□□□ 0.7
Grik3B1AS29 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.4■□□□□ 0.7
Grik3B1AS29 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Grik3B1AS29 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Grik3B1AS29 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Grik3B1AS29 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.39■□□□□ 0.69
Grik3B1AS29 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Mir7071-201ENSMUST00000184847 69 ntBASIC19.39■□□□□ 0.69
Grik3B1AS29 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.39■□□□□ 0.69
Grik3B1AS29 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.39■□□□□ 0.69
Grik3B1AS29 Gm10138-203ENSMUST00000206952 366 ntBASIC19.39■□□□□ 0.69
Grik3B1AS29 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.39■□□□□ 0.69
Grik3B1AS29 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.39■□□□□ 0.69
Grik3B1AS29 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.39■□□□□ 0.69
Grik3B1AS29 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Grik3B1AS29 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.38■□□□□ 0.69
Grik3B1AS29 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.38■□□□□ 0.69
Grik3B1AS29 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.38■□□□□ 0.69
Grik3B1AS29 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.38■□□□□ 0.69
Grik3B1AS29 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Grik3B1AS29 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Grik3B1AS29 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.37■□□□□ 0.69
Grik3B1AS29 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.37■□□□□ 0.69
Grik3B1AS29 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Grik3B1AS29 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms