Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sh2d4bA6X942 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Gm2399-201ENSMUST00000104944 225 ntBASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d4bA6X942 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.35■□□□□ 0.69
Sh2d4bA6X942 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d4bA6X942 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Gm13158-201ENSMUST00000122007 736 ntBASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d4bA6X942 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d4bA6X942 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d4bA6X942 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sh2d4bA6X942 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sh2d4bA6X942 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d4bA6X942 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4bA6X942 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms