Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Reep4-203ENSMUST00000226563 1444 ntBASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-1A0N8R1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav12-1A0N8R1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav12-1A0N8R1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-1A0N8R1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
Trav12-1A0N8R1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms