Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 AC140930.3-201ENSMUST00000222935 274 ntBASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Igkv1-88A0A140T8N1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Dmtn-207ENSMUST00000228001 2437 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm11421-201ENSMUST00000122124 294 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm7860-201ENSMUST00000121190 879 ntBASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms