Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm11249-201ENSMUST00000117071 859 ntBASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm13158-201ENSMUST00000122007 736 ntBASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm715-201ENSMUST00000117865 831 ntBASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpl13a-ps1A0A140T8K2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm2399-201ENSMUST00000104944 225 ntBASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpl13a-ps1A0A140T8K2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms