Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc194A0A140LIT1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc194A0A140LIT1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc194A0A140LIT1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc194A0A140LIT1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc194A0A140LIT1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc194A0A140LIT1 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc194A0A140LIT1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms