Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm40848-201ENSMUST00000221998 324 ntBASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Fst-202ENSMUST00000223640 2612 ntBASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm43173-201ENSMUST00000202246 593 ntBASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms