Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-2A0A0G2JF93 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm43566-201ENSMUST00000196851 808 ntBASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav13n-2A0A0G2JF93 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm5898-201ENSMUST00000121016 2071 ntBASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13n-2A0A0G2JF93 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms