Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav9-4A0A0B4J1K2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-4A0A0B4J1K2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm26524-201ENSMUST00000192339 390 ntBASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-4A0A0B4J1K2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9-4A0A0B4J1K2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm22325-201ENSMUST00000158904 308 ntBASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9-4A0A0B4J1K2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms