Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.4□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-3A0A0B4J1K1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-3A0A0B4J1K1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-3A0A0B4J1K1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-3A0A0B4J1K1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-3A0A0B4J1K1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-3A0A0B4J1K1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms