Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav11A0A0B4J1J9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav11A0A0B4J1J9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav11A0A0B4J1J9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Gm43137-201ENSMUST00000198052 594 ntBASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav11A0A0B4J1J9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav11A0A0B4J1J9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms