Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv5-43A0A0B4J1J2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.52■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv5-43A0A0B4J1J2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Igkv5-43A0A0B4J1J2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Igkv5-43A0A0B4J1J2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.52■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm715-201ENSMUST00000117865 831 ntBASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms