Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.13□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.12□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms