Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 AC107452.1-201ENSMUST00000227963 481 ntBASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv3A0A0A6YYE2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv3A0A0A6YYE2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv3A0A0A6YYE2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv3A0A0A6YYE2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm22238-201ENSMUST00000175222 88 ntBASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv3A0A0A6YYE2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms