Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-1A0A075B699 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-1A0A075B699 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-1A0A075B699 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-1A0A075B699 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav9d-1A0A075B699 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.97□□□□□ -0.17
Trav9d-1A0A075B699 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-1A0A075B699 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-1A0A075B699 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9d-1A0A075B699 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms