Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm18284-201ENSMUST00000172604 624 ntBASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-7-dv9A0A075B639 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6-7-dv9A0A075B639 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6-7-dv9A0A075B639 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-7-dv9A0A075B639 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-7-dv9A0A075B639 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav6-7-dv9A0A075B639 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-7-dv9A0A075B639 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms