Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9n-4A0A075B631 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Rarb-207ENSMUST00000225921 2756 ntBASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9n-4A0A075B631 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9n-4A0A075B631 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-4A0A075B631 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Trav9n-4A0A075B631 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9n-4A0A075B631 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9n-4A0A075B631 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms