Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6n-5A0A075B621 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6n-5A0A075B621 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6n-5A0A075B621 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.04□□□□□ -0.16
Trav6n-5A0A075B621 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-5A0A075B621 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-5A0A075B621 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-5A0A075B621 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-5A0A075B621 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-5A0A075B621 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-5A0A075B621 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms